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  • These microarrays assayed 68 conditions including pH changes, growth phases, antibiotics, heat shock, different media, varying oxygen concentrations, numerous genetic perturbations, several carbon sources, and nitrate.Microarray normalization.Raw probe intensities were normalized to gene expression levels using MAS5 (Affymetrix), RMA [44], GCRMA [45], and Dchip PM [46].
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